Independent guideAll prices in GBPPrices checked Updated

Best Payroll Software for Accountants and Payroll Bureaus in the United Kingdom (2026)

For an accountant or payroll bureau running UK client payrolls, Staffology and BrightPay are the two products whose target market in our data names bureaus. Staffology publishes a flat £43 a month for up to 20 payslips, while BrightPay prices through a calculator on its own site. Where a client keeps its books in Xero, Xero Payroll posts wages into that client's ledger, and FreeAgent includes payroll at no charge per employee for director-only companies.

Independent guide by SME Compare. How we compare

Our top picks for accountants and payroll bureaus

1Best if you want a published price per payslip
Staffology logo

Staffology

4.3Capterra£2.15/payslip

Staffology is IRIS's cloud payroll, and our data lists its market as Accountants, bureaus, scaling SMB. It publishes a price we can cost at bureau volumes: a flat £43 a month covers up to 20 payslips, then each payslip costs £2.15 more.

  • Accounting integration: Xero, Sage, QBO (API)
  • Pension schemes: NEST + major
  • Contract: No

Watch out: The charge is per payslip per pay run, so a weekly-paid client generates four or five times the payslips of a monthly one, and IRIS quotes rather than publishes a price above 50 payslips a month.

2Best if many of your clients pay CIS subcontractors
BrightPay logo

BrightPay

4.9CapterraGet quote

BrightPay is HMRC-recognised payroll sold to small businesses and to bureaus, and its CIS module comes at no extra charge, which matters when a share of your client book is in construction. It has been sold only as a cloud subscription since the 2026 to 2027 tax year.

  • Bureaus named in its target market
  • CIS module included at no extra charge
  • Employee app through BrightPay Connect

Watch out: BrightPay sets its cloud price through an interactive calculator on its own site rather than a rate card, so our table cannot cost it and shows Get quote; take each client's figure from that calculator.

3Best if your clients already keep their books in Xero
Xero logo

Xero

4.4Capterra£1.50/emp/mo

Xero Payroll runs inside the client's own Xero subscription, so wages, tax and pension costs post to that client's ledger without a journal. The plan in our table is £18/mo (Ignite) with payroll at £1.50/emp/mo; Xero's dearer plans include a set number of people, then charge for each extra person.

  • Accounting integration: Xero (native)
  • CIS: Yes (add-on)
  • Support: 24/7 online

Watch out: Each client pays for its own Xero plan, so the payroll fee is economic only for clients who want Xero for their books as well.

4Best for director-only limited company clients
FreeAgent logo

FreeAgent

4.5Capterra£0 (included)

FreeAgent includes payroll in its accounting subscription at £0 (included) per employee, so a director paid a salary through PAYE adds nothing to the client's bill. The plan in our table is £33/mo (or free w/ NatWest), the free route being for clients who bank with NatWest, RBS or Ulster Bank, or use Mettle.

  • Payroll per employee: £0 (included)
  • Built for: Sole traders / micro Ltd / contractors
  • Pension schemes: NOW:Pensions, Penfold

Watch out: Our data records FreeAgent's employee self-service as Limited, and notes it does not file the monthly CIS300 return itself, so it suits small company payrolls rather than a construction client with subcontractors.

Compare the picks at your numbers

Enter your business details to see what each option would cost you. Prices are live from our database and shown in pounds sterling.

4 ProvidersStaffology logoStaffologyBrightPay logoBrightPayXero logoXeroFreeAgent logoFreeAgent
Est. Cost /mo (GBP)£43/mo£33/moCheapest£33/moCheapest
Ratings
4.3Capterra (~4 (very thin sample))4.9Capterra (345)4.4Capterra (3,299)4.5Capterra (175)
Costs & Pricing
£2.15/payslipGet quote£1.50/emp/moBest£0 (included)
£43/mo (up to 20)Get quoteBest£18/mo (Ignite)£33/mo (or free w/ NatWest)
NoNoNoYes (with NatWest/RBS)
NoNoNoNo
————
YesCIS onlyYesYes
NoNoNoNo
Tax & Compliance
YesYesYesYes
YesYesYesYes
YesYesYesYes
NEST + majorNEST, TPP, Smart, AvivaNEST + majorNOW:Pensions, Penfold
YesYesYesYes
YesYes (free)Yes (add-on)Yes
YesYesYesYes
NoNoNoNo
NoNoNoNo
NoNoNoNo
AI
Native + add-ons (Autopilot)Native (Oscar AI onboarding)Native (JAX)Native (Smart Capture, Radar)
API onlyAPI onlyNative MCP (official)Via 3rd-party (Zapier)
Features & Integrations
YesYes (Connect)YesLimited
YesYes (Connect)YesLimited
YesLimitedYesYes
Xero, Sage, QBO (API)Xero, Sage, QBOXero (native)FreeAgent (native)
UK (IRIS)UK phone24/7 onlineUK support
Estimates based on 10 employees. Rates can change without notice, confirm current pricing with the provider before signing on.
How we calculate this
  • Estimated cost: each provider’s published prices and rates applied to the inputs you set above (such as volume, team size, or invoices), plus any fixed monthly fees.
  • Providers with an incomplete cost and quote-only providers are never ranked as the cheapest while a complete-cost option exists.
  • These are estimates. Published rates can change and your final pricing depends on your business, so confirm current pricing with the provider before switching.

If you run payroll for other businesses, as an accountant, a bookkeeper or a payroll bureau, the software is your production line rather than a back-office tool. It has to handle many employers at once, each with its own PAYE reference, pay dates and pension scheme, and its price has to work at the volume of payslips you process, not at one company's headcount.

This guide is for practices running client payrolls. If you are a business choosing payroll for your own staff, our guide to payroll software for small business covers that decision, including when to hand payroll to a bureau.

How we chose. A practice buys payroll software to run other people's payrolls, so we judged each of the 13 payroll providers in our UK data from the bureau's side of the desk, with costs from the engine behind our payroll software comparison. Four things counted: a market our data records as including accountants or bureaus, a price we can cost at client sizes, HMRC recognition with RTI, and support for auto-enrolment and the pension schemes your clients use. Our calculator prices one employer's payroll, so the table above opens at 10 employees as a single client; change the headcount to match one of yours. No pick is here, or placed higher, because a vendor pays us.

What should accountants and payroll bureaus look for in payroll software?

An accountant or payroll bureau needs payroll software that handles many client employers from one login, prices sensibly at the number of payslips you run, files RTI to HMRC for each client, and runs pension auto-enrolment client by client. Our data covers the compliance and pricing half of that list well. It does not yet record practice features such as multi-client dashboards or white labelling, so those are questions to ask.

What a practice needsWhat our data says
A price that works at bureau volumesPublished prices, costed in the table above and by client size below
HMRC recognition and RTI submissionsA column for each, per provider
Pension auto-enrolment and scheme connectionsA column for each, per provider
CIS for construction clientsA column per provider, with plan and add-on qualifiers
Employee payslip portal or appEmployee self-service and mobile app columns
Who the product is built forA target market column, shown in full below
Many clients under one login, bulk pay runs, white labelling, practice pricingNot recorded: ask the vendor, using the questions further down

GOV.UK's guide to choosing payroll software adds a warning that matters more to a bureau than to any single employer: some software will not produce payslips, record or pay pension deductions, pay different people over different periods (both weekly and monthly), or send an Employer Payment Summary or Earlier Year Update. Across a client book, each of those cases can come up.

Which payroll software is built for accountants and bureaus?

Among the UK payroll software we list, our data names accountants or bureaus in the target market of Staffology and BrightPay. The others are sold to employers directly, though several, Xero and QuickBooks Online included, are products accountants also run on their clients' behalf. Here is the market our data records for each, with our wording intact.

ProviderTarget market in our data
BrightPayMicro to mid SMB + bureaus
StaffologyAccountants, bureaus, scaling SMB
SageSmall UK business to ~150 emp
XeroXero accounting users / SMB
QuickBooks OnlineQuickBooks users / small SMB
FreeAgentSole traders / micro Ltd / contractors
Employment HeroGrowing SMB (HR + payroll)
MoorepaySMEs ~50-500 emp (outsourced)

Some providers in this category do not fit a UK practice running domestic payrolls, and we leave them out of the picks for that reason. Deel, Remote, Papaya Global and Payoneer Workforce Management are built to employ or pay people across borders; their global payroll cells read Yes (100+ countries), Yes (global), Yes (160+ countries) and Yes (160+ countries, EOR). Rippling is an HR, IT and payroll platform whose target market reads Mid-market (HR + IT + payroll). If a client employs abroad, our payroll guide for global teams covers those.

Moorepay is in the table because it is a managed payroll service, in effect a bureau itself, with prices on request; our data records its contract term as Annual. For a practice it is the alternative to running payroll, not a tool to run it with: worth knowing if you would rather refer a larger client than take its payroll on.

How is payroll bureau software priced: per client, per employee or per payslip?

Payroll software for accountants and bureaus is priced in one of three ways: a subscription per client employer, a count of payslips across your whole account, or a practice rate given on request. The published prices we hold describe a single employer, so the figures below show what one client of a given size costs. Ask each vendor which count it bills a practice on.

Provider1 employee5 employees10 employees20 employees50 employees
Sage logoSage£12£12£24£37.50£75
Xero logoXero£19.50£25.50£33£48£93
Deel logoDeel£21.67£108.35£216.70£433.40£1,083.50
Papaya Global logoPapaya Global£21.67£108.35£216.70£433.40£1,083.50
Remote logoRemote£21.67£108.35£216.70£433.40£1,083.50
QuickBooks Online logoQuickBooks Online£22.50£28.50£36£51£96
Employment Hero logoEmployment Hero£30 min£30 min£30 min£60£150
FreeAgent logoFreeAgent£33£33£33£33£33
Rippling logoRipplingfrom £37from £65from £100from £170from £380
Staffology logoStaffology£43£43£43£43£107.50
BrightPay logoBrightPayGet quoteGet quoteGet quoteGet quoteGet quote
Moorepay logoMoorepayGet quoteGet quoteGet quoteGet quoteGet quote
Payoneer Workforce Management logoPayoneer Workforce ManagementGet quoteGet quoteGet quoteGet quoteGet quote

Estimated monthly cost in pounds for one employer on each provider's entry plan, at the price each provider publishes; we do not add or remove VAT. Prices published in US dollars are converted at 0.7471 USD to GBP, captured 12 June 2026. Plans and pricing checked October 2026. "min" means the provider's monthly minimum is the whole bill at that size, and "from" marks a published starting price. Get quote means the provider does not publish a price we can cost.

The 1-employee column is a director-only company. The 20 and 50 columns are where per-payslip pricing shows: Staffology's flat £43/mo covers up to 20 payslips, and each one above that costs £2.15/payslip. Our data notes the charge is per payslip per run, so a weekly payroll counts four or five times a month, and that IRIS quotes rather than publishes a price above 50 payslips a month.

Xero and QuickBooks Online work the other way. Payroll is an add-on to the client's own accounting subscription, charged per employee: £1.50/emp/mo at Xero and £1.50/emp/mo at QuickBooks Online. FreeAgent includes payroll in its subscription with no charge per employee. BrightPay prices its cloud product through a calculator on its own site, which our table cannot cost.

None of these published figures is a practice price. Before you compare a bureau plan, get answers in writing to the questions in the last section of this guide.

RTI, HMRC recognition and registering as a payroll agent

A payroll bureau or accountant filing RTI for clients needs two things from HMRC. The software must be able to send each client's Full Payment Submission and Employer Payment Summary, and your firm must now be registered with HMRC as a tax adviser, a requirement HMRC is bringing in by stages. Our data records HMRC recognition and RTI filing for each pick.

ProviderHMRC-recognisedRTI / FPS to HMRCYear-end (P60/P45)
StaffologyYesYesYes
BrightPayYesYesYes
XeroYesYesYes
FreeAgentYesYesYes

HMRC publishes its own list of recognised payroll software, updated through 2026, and says it cannot recommend one product over another. HMRC's free Basic PAYE Tools is not an option for a practice: its user guide says it is not suitable for agents and bookkeepers.

Registering as a tax adviser. HMRC's guidance on when you need to register as a tax adviser says anyone who interacts with HMRC about someone else's tax affairs and gets paid for it must register for an agent services account, and that includes sending returns for clients. A firm that only provides third-party payroll services on behalf of clients, and deals with HMRC in no other way, must register from 18 November 2026. Each firm has 3 months from its window opening to apply, and an existing agent services account means you do not register again. Payroll software developers themselves are exempt, but a bureau using their software is not.

Running auto-enrolment across a client book

For an accountant or bureau, pension auto-enrolment is a duty you carry out for each client employer separately: assessing staff every pay run, sending contributions to each client's scheme, and completing each client's declaration of compliance. Payroll software for a practice should do the first two inside the pay run, for every scheme your clients use.

The Pensions Regulator's guide for business advisers lists what payroll software should do each pay cycle: assess staff, hold the data enrolment needs, calculate contributions with the right tax relief method, send contribution data to the scheme in its format, handle opt-ins, opt-outs and refunds, offer flexible postponement, and keep records for up to six years. Clients on Basic PAYE Tools or with no software need their own process to assess staff and calculate contributions.

ProviderAuto-enrolmentPension schemes
StaffologyYesNEST + major
BrightPayYesNEST, TPP, Smart, Aviva
XeroYesNEST + major
FreeAgentYesNOW:Pensions, Penfold

"NEST + major" means the software connects to NEST and other large workplace pension schemes. A practice inherits whatever scheme each client chose, so list your clients' schemes and check each one against the provider's own list before you move them.

The Pensions Regulator also lets you submit declarations for many clients at once, by uploading one CSV file with a row per employer, and in doing so you confirm you are authorised by each employer to submit on its behalf. Its nomination service sends you the email alerts about each client's duties and deadlines.

Client portals, payslip delivery and bulk processing: what to ask

Practice features such as running many clients' pay runs in one batch, a client dashboard, white-labelled payslips or a practice-level price are where payroll products for accountants can differ, and our data does not record them. What it does record is whether each client's employees can see payslips in a portal or app.

ProviderEmployee self-serviceMobile appCIS
StaffologyYesYesYes
BrightPayYes (Connect)Yes (Connect)Yes (free)
XeroYesYesYes (add-on)
FreeAgentLimitedYesYes

A word in brackets qualifies the yes: the product it comes through, "add-on" for an extra charge, or "free" for included. Ask each vendor these, in writing, so the answers line up:

AskWhy it matters to a practice
Do you bill per client employer, per payslip across my account, or at a practice rate?It decides whether a book of small clients is cheap or dear
Does a client with no pay run in a month still cost anything?Seasonal and dormant clients add up
Can I run several clients' pay runs and RTI submissions in one batch?Payday clusters at month end
Can I see every client's status, deadlines and submissions on one screen?A missed FPS is a client's penalty and your problem
Do payslips and the employee portal carry my practice's name or yours?Clients and their staff should know who runs their payroll
Can each client approve its pay run before I submit it?It keeps the employer's sign-off on record
How do I move a client's payroll history in, and out again?Employers must keep payroll records for 3 years

The last point is set by HMRC's rule on keeping payroll records, which binds the client as employer whoever holds the data.

Which payroll software suits your practice?

The right payroll software for an accountant or payroll bureau depends on the shape of the client book: how many small employers you run, how many are in construction, which ledger they keep their books in, and how many are director-only companies. Match the largest group first, rather than choosing by the price column alone:

  • You run payroll for many small employers and want a published price per payslip: Staffology, then check how it bills across clients.
  • A good share of your clients pay subcontractors under CIS: BrightPay, priced from its own calculator.
  • Your clients keep their books in Xero, and pay for it themselves: Xero Payroll, client by client; QuickBooks Online does the same for QuickBooks clients.
  • Your payroll list is mostly director-only limited companies: FreeAgent, where payroll adds nothing per employee to the client's subscription.
  • You would rather not run payroll for a larger client at all: a managed service such as Moorepay, priced on request.

A practice can run two of these side by side, one for clients on their own cloud ledger and one payroll-only product for everyone else.

Frequently asked questions

What is payroll bureau software?

Payroll bureau software is payroll software built for a firm that runs payroll for other employers. It keeps each client as a separate employer, with its own PAYE reference, pay dates and pension scheme, sends each client's RTI submissions to HMRC, and is usually priced on the payslips you process across your client book rather than on one company's headcount.

What payroll software do accountants use for client payrolls?

Two kinds fit a practice. A practice that runs many small payrolls can use a payroll-only product sold to bureaus, such as Staffology or BrightPay in our data, and exports journals to each client's books. A practice whose clients use one cloud ledger can run payroll inside it, Xero Payroll or QuickBooks payroll, client by client.

Can I use HMRC's free Basic PAYE Tools to run payroll for clients?

HMRC's own user guide says Basic PAYE Tools is not suitable for agents and bookkeepers. It is meant for an employer with fewer than 10 employees running its own payroll, and it does not handle pension auto-enrolment, so it is not a practical tool for a client book.

Do payroll bureaus need to register with HMRC?

Yes, if you are paid to deal with HMRC about someone else's tax affairs, which includes sending payroll submissions for clients. HMRC now counts you as a tax adviser, which means an agent services account. Registration is phased by type of firm; the dates are in the section on HMRC above.

Is payroll software priced per client or per payslip?

It varies, and the published prices we hold do not say. Some products price each client employer as its own subscription, some count every payslip across the account, and some give practices their own rate on request. Ask the vendor in writing which count it bills on, and whether a client with no pay run in a month still costs anything.

Can my payroll clients' employees see their payslips online?

With each of our picks, in some form, through an employee portal or app, though on some it is limited or comes through a separate product. The employee self-service column on this page gives our wording for each pick. Ask whether the portal carries your practice's name or the vendor's.

How does SME Compare choose the best payroll software for accountants and payroll bureaus?

We are independent and not owned by any provider. Our picks weigh price, features and UK fit for accountants and payroll bureaus, using live pricing from our database, last checked 4 October 2026. The comparison table lets you estimate each option at your own numbers. See How we compare for our full method.

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